Resources
Teaching Materials & Interactive Tools for Research and Education
Teaching Materials
Reading & Writing Papers
Paper reading and writing notes for the LLM era.
Atomic Simulation in Python
DFT, MD, and ML potentials in Python. GitHub link.
Atomic Visualization with Blender
3D molecular rendering with Blender.
Research Figures in Python
Scientific plotting with Matplotlib and Seaborn.
Free Energy in Catalysis
Free energy basics for catalysis calculations.
My AI Adoption Journey
Notes on using chatbots, Cursor, and Claude Code.
Software & Tools
Talk&Listen
Mobile AI voice assistant.
Oxidation State Estimator
Bader charge based oxidation state estimator.
Nanocluster Digital Universe
Interactive nanocluster periodic table.
CCEL Collaboration Network
CCEL collaboration network map.
GNN Architecture Gallery
Visual guide to GNN architectures.
National Strength Dashboard
World Bank based national strength dashboard.
World University Rankings
Global university rankings comparison.
South Korea University Rankings
THE, QS, ARWU 5-year audit for 24 Korean universities.
Journal Impact Rankings
JCR journal metrics and impact factor comparison.
Conference Tracker
Conference schedule and deadline tracker.
CatAgent Demo
Multi-agent LLM framework for catalyst search space exploration.
Blog
30th March 2026
Too late for CCS and hydrogen?
Reflections on Allwood's argument that deployment speed matters as much as technical quality and what that means for catalyst design in a power constrained world.
22nd March 2026
AutoAdsorbate: Simple Heuristics for Advanced Sampling
A review of Fako and De on automated adsorbate placement, surrogate SMILES, and what the workflow shows when tested directly with Claude Code.
22nd March 2026
Seeing Is Not Always Believing
A research note on why atomic observation does not guarantee understanding and how the gap between simulation and real catalysts keeps returning.
12th March 2026
Panopticon
A short essay on how surveillance infrastructure had already settled into daily life before AI made the system more visible.